[copyright] change email to contact@logilab.fr

fix traceback on calling --help ... because the parser does not exit on querying help.

refact: split h5fs.py into modules in the ``h5fslib`` package This changeset just moves codes. ..note: This change simplify the implementation of other export formats as core specific code is more identifiable.

add documentation about bin/h5fs that is used to produce a manpage

add debian/ to build .deb package The following package are needed: - devscripts, - python-all-dev, - python-stdeb, - fuse (>= 2.9.2), - python-fuse (>= 2:0.2.1) To build the package:: $ debuild $ litian -i ... $ ... More information at: http://docs.python.org/2/distutils/sourcedist.html

add license

add a README that describe the project.

add setup.py

add an executable script

datasets are now exported as .npy file format 1.0 Here is an example of usage:: $ mkdir /tmp/imageb/ $ python h5fs.py test/data/ex_image1.h5 /tmp/image/ $ tree /tmp/image/ /tmp/image ├── image1.npy └── pallete.npy 0 directories, 2 files $ python >>> import numpy >>> arr = numpy.load('/tmp/image/image1.npy') >>> arr.shape (200, 400, 1) >>> arr[::10, 10, :].T array([[0, 0, 0, 1, 1, 2, 2, 3, 3, 4, 4, 4, 5, 5, 6, 6, 7, 7, 8, 8]], dtype=uint8) >>> exit() $ fusermount -u /tmp/image

fix some docstrings and comments

refact: set a better name to the main function

Add read capability: raw flatten array data of DataSets can be read :: $ mkdir /tmp/image $ python h5fs.py test/data/ex_image1.h5 /tmp/image $ echo 'Let see the FS ' $ tree /tmp/image /tmp/image/ |-- image1 `-- pallete 0 directories, 2 files $ ls -lah /tmp/image/image1 -r-------- 1 alain users 79K Jan 1 1970 /tmp/image/image $ echo 'Here what we can do' $ python >>> f = open('/tmp/image/image1') >>> f.seek(0, 2) >>> print f.tell()/1024. 78.125 >>> import struct >>> f.seek(0) >>> data = struct.unpack('80000B', f.read()) >>> len(data) 80000 >>> import numpy >>> f.seek(0) >>> arr = numpy.empty((50, 16, 20, 5), dtype='|u1') >>> f.readinto(arr.data) 80000 >>> arr[::8,2,5,2] array([0, 1, 2, 4, 5, 7, 8], dtype=uint8) >>> exit() $ echo 'It was funny, now terminate all.' $ fusermount -u /tmp/image $ rm -r /tmp/image $ echo 'it is all folk!'

refactorization - separate fs specific code to hdf5 specific codes - user better names - use generators instead of list - move functions to class method as they should be overwriten for future implementations

minimal implementation: allow to display the data tree :: python h5fs.py path/to/hdf5file.hdf5 /path/to/mountpoint tree /path/to/mountpoint